Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913639.1_cds_XP_016463673.1_56774
CDS Infomation

[gene=LOC107786670] [db_xref=GeneID:107786670] [protein=non-lysosomal glucosylceramidase-like isoform X2] [protein_id=XP_016463673.1] [location=join(31442..31484,31712..31801,31882..31985,32081..32134,32293..32348,33041..33079,33210..33354,35624..35805,35894..35961,36145..36217,36287..36348,36434..37358,37649..37939,39087..39255)] [gbkey=CDS]
Sequence

ATGGTGAAAATTATTCTACTGTGTTATGCCCAAGAACTCCAAACTTGTGGAATAGGATCC
TGGGACTGGAATCTGGGTGGCCAAAATTGTACATATCATGCTCTGTTTCCAAGAGCGTGG
ACTGTATACGAAGGGGAACCTGATCCGGAACTCAGGGTAGTATGCCGTCAGATCTCTCCT
TTTATCCCCCACAACTACAAAGAGAGCAGCTTACCTACAGCAGTCTTTACTTTCACGGTT
CATAACTTGGGAAAGACGTCTGCAGATGTCACTTTGCTTTTCACCTGGGCAAATTCTGCT
GGTGGAGATTCTGGAATTTCTGGCCATCATTTCAATTCAAAGTTTAGAATGGAAGATGGA
GTCCAAGGCGTACTCTTGCACCACATGACTTCCAAAGAACGGCCTTCTGTAACTTTTGCA
ATTGCAGCAGAGGCAAATGATACAGTTCACGTCTCTGAGTGCCCTTTCTTTGTGATATCT
GGAGACTCCCAGGGAATTACAGCAAAAGATATGTGGAATGAAGTAAAAAAGAATGGATCC
TTTGATCACCTCCAATCTGAGGAAATGTCAATGCCTTCTGATCCGGGATCACTTGTTGGA
GCGGCAGTTGCAGCTTCACTAACTATTCCAGCAGATGATGTAAAAAGTGTGACATTCTCA
TTGGCATGGGCCTGCCCTGAAATTAATTTTGCAAGTGGTAGAACTTATCACAGGCGCTAC
ACAAAGTTTTATGGTACTACGGGGCATGCTGCTGCAAAAATTGCACATGATGCTATCCAG
GAGCACACCCAGTGGGAGTCACAAATAGAAGAATGGCAGAAACCTATAATTGAAGACAAG
AGGCTTCCCGAATGGTATCCAATAACTCTCTTCAATGAGCTCTATTATTTAAATGCTGGG
GGGACAATTTGGACAGATGGATTGCCACCAGTTCAAAAATTATCAACAATTGGGAAAAGA
TTTTCCATAGATAGATCTAGTTTGGATGTAAAAGTAAGTGCTGATCCAACCCAGTCAGAT
GATACTGCTGTTCTCATTCTTGAAAGGATGGGCTCGGTGCTTGATGAACTTCAAACTCCT
GTCTCAGTAAATGCTGCTGTCGGGACAAATCTTCTTCAGAAGGGAGAGGAAAATGTTGGC
CAGTTCCTCTATCTTGAAGGGATTGAATATTATATGTGTAACACATATGATGTTCATTTT
TATGCATCTTTTGCTTTGACTATGCTATTCCCAGAACTTGAACTTAGCATACAACGAGAC
TTTGCAGCTGCTGTGATGATGCATGATCCAAGTAAGAGATTGCTCTTGGATGATGGAATG
TCTGCGACAAGGAAAGTTCTTGGCGCTGTTCCTCATGATATTGGAATGGATGATCCCTGG
TTTGAAGTAAATTACTATTGCCTGTATAACACAGATAGGTGGAAAGATTTGAATCCAAAA
TTTGTTCTTCAAGTTTACAGGGATTTTGTTGCGACAGGTGATAAAAAGTTTGTCGAAGCT
GTTTGGCCATCTGTGTATATGGCAATGGCTTTCATGGATCAATTTGATAAGGATGGGGAT
GGGATGATAGAAAATGAAGGATTTCCTGATCAGACATATGATGTATGGTCTGTCTCTGGT
GTGAGTGCATACAGTGGTGGCCTATGGGTGGCAGCTTTGCAGGCTGCATCAGCCTTAGCT
CGAGAAGTTGGTGACAAGGGTTCTGAAGACTACTTTTGGTTTAAGTTTCAGAAAGCAAAG
GAAGTTTATCAAAAATTGTGGAATGGTTCTTACTTTAACTACGATAATAGTGGCAGTGCC
GTAAGCTCGTCCATTCAAGCTGATCAGTTGGCTGGACAATGGTACGCTCGAGCATGTGGT
CTTCTACCAATTGTTGATGAAGAAAAAGCTAAAACTACATTTGAGACAGTGTTCAATTTC
AATGTCATGAAGGTCAAGGATGGGAAACGAGGAGCAGTGAATGGGATGCGGCCCAATGGA
GAGCCTGACTCATCTAGTTTGCAATCAAGGGAGATATGGTCTGGAGTTACATATGCTGTT
GCGGCAGCCATGATTCATGAAGACATGGCTGATATGGGATTTAAAACTGCAGCTGGAGTC
TACGAAACCGTTTGGTCTGAAGATGGCTTTGGAAAGGACAGAAACTTCTTAAGAAACAGG
GATGGGAATTACTCCTGTACAGAAGTGTCAATAATTGCACAGAGCTTTCCAGAGAGAGGA
AGACTTTCAATAACAAAATCAGCAAATGAATTTGGAAACAAAGGCTGGATTTGGAGGTTC
AGGGTGTCACATTGTTTTTAG

Peptide Sequence

PEP ID

XP_016463673.1
PEP Infomation

PREDICTED: non-lysosomal glucosylceramidase-like isoform X2 [Nicotiana tabacum]
Sequence

MVKIILLCYAQELQTCGIGSWDWNLGGQNCTYHALFPRAWTVYEGEPDPELRVVCRQISP
FIPHNYKESSLPTAVFTFTVHNLGKTSADVTLLFTWANSAGGDSGISGHHFNSKFRMEDG
VQGVLLHHMTSKERPSVTFAIAAEANDTVHVSECPFFVISGDSQGITAKDMWNEVKKNGS
FDHLQSEEMSMPSDPGSLVGAAVAASLTIPADDVKSVTFSLAWACPEINFASGRTYHRRY
TKFYGTTGHAAAKIAHDAIQEHTQWESQIEEWQKPIIEDKRLPEWYPITLFNELYYLNAG
GTIWTDGLPPVQKLSTIGKRFSIDRSSLDVKVSADPTQSDDTAVLILERMGSVLDELQTP
VSVNAAVGTNLLQKGEENVGQFLYLEGIEYYMCNTYDVHFYASFALTMLFPELELSIQRD
FAAAVMMHDPSKRLLLDDGMSATRKVLGAVPHDIGMDDPWFEVNYYCLYNTDRWKDLNPK
FVLQVYRDFVATGDKKFVEAVWPSVYMAMAFMDQFDKDGDGMIENEGFPDQTYDVWSVSG
VSAYSGGLWVAALQAASALAREVGDKGSEDYFWFKFQKAKEVYQKLWNGSYFNYDNSGSA
VSSSIQADQLAGQWYARACGLLPIVDEEKAKTTFETVFNFNVMKVKDGKRGAVNGMRPNG
EPDSSSLQSREIWSGVTYAVAAAMIHEDMADMGFKTAAGVYETVWSEDGFGKDRNFLRNR
DGNYSCTEVSIIAQSFPERGRLSITKSANEFGNKGWIWRFRVSHCF

Transcript Sequence

Gene sequence data has not been registered.